XBone Controller not working in Dark Souls Remastered

I noticed this just yesterday. It was working fine a few days ago, but now when I kick off the game all I get are keyboard prompts, no buttons. It is completely unresponsive to the controller. I have DS3 in Lutris and the controller works just fine.

I have tried to fix it by removing all things Wine and Lutris, folders under .Wine and .local/share/lutris, and reinstalling, but no success.

Any ideas how I can fix this (I know it is basically a dead game as far as multiplayer on PC, but I would still appreciate any suggestions).